林勇欣 助理教授 國立交通大學 生物資訊及系統生物研究所

Yeong-Shin Lin, Assistant Professor
Institute of Bioinformatics and Systems Biology
National Chiao Tung University
Hsinchu, Taiwan
Main Page Lab Members Lectures Resources Bioinformatics Center

Research Interests

I am interested in developing and applying methods and tools in Bioinformatics to study various problems in Genomics, Structural Biology, and Evolutionary Biology.

Publications

  • Computational Genomics

  • Computational Structural Biology

      Yeong-Shin Lin*. (2008). Using a strategy based on the concept of convergent evolution to identify residue substitutions responsible for thermal adaptation. Proteins: structure, function, and bioinformatics. 73: 53-62.
      [e-journal] [PubMed] [IF] [Cited by]

      Chih-Hao Lu, Yeong-Shin Lin, Yu-Ching Chen, Chin-Sheng Yu, Shi-Yu Chang, and Jenn-Kang Hwang*. (2006). The fragment transformation method to detect the protein structural motifs. Proteins: structure, function, and bioinformatics. 63: 636-643.
      [e-journal] [PubMed] [IF] [Cited by]

      Yu-Ching Chen, Yeong-Shin Lin, Chih-Jen Lin and Jenn-Kang Hwang*. (2004). Prediction of the bonding states of cysteines using the Support Vector Machines based on multiple feature vectors and Cysteine State Sequences. Proteins: structure, function, and bioinformatics. 55: 1036-1042.
      [e-journal] [PubMed] [IF] [Cited by]
  • Phylogenetics

      Chyng-Shyan Tzeng*, Yeong-Shin Lin, Si-Min Lin, Tzi-Yuan Wang, and Feng-Yung Wang. (2006). The phylogeography and population demographics of selected freshwater fishes in Taiwan. Zoological Studies. 45: 285-297.
      [e-journal] [PubMed] [IF] [Cited by]

      Yeong-Shin Lin*, Chyng-Shyan Tzeng, and Jenn-Kang Hwang*. (2005). Reassessment of morphological characteristics in freshwater eels (genus Anguilla, Anguillidae) shows congruence with molecular phylogeny estimates. Zoologica Scripta. 34: 225-234.
      [e-journal] [PubMed] [IF] [Cited by]

      Yeong-Shin Lin, Yu-Ping Poh, Si-Min Lin, and Chyng-Shyan Tzeng*. (2002). Molecular techniques to identify freshwater eels: RFLP analyses of PCR-amplified DNA fragments and allele-specific PCR from mitochondrial DNA. Zoological Studies. 41: 421-430.
      [e-journal] [PubMed] [IF] [Cited by]

      Yeong-Shin Lin, Yu-Ping Poh, and Chyng-Shyan Tzeng*. (2001). Which is the dispersal route of the ancient Atlantic eels: Reanalysis of the phylogeny of freshwater eels. Journal of Taiwan Fisheries Research. 9: 161-173.
      [e-journal] [PubMed] [IF] [Cited by]

      Yeong-Shin Lin, Yu-Ping Poh, and Chyng-Shyan Tzeng*. (2001). A phylogeny of freshwater eels inferred from mitochondrial genes. Molecular Phylogenetics and Evolution. 20: 252-261.
      [e-journal] [PubMed] [IF] [Cited by] [Cited by The Eel ]

  • Contact

    Office:+886-3-5712121 # 56960
    Lab:+886-3-5712121 # 56961
    Fax:+886-3-5729288
    +886-3-5712121 # 56960
    Email:yslinfaculty.nctu.edu.tw
    Address:R103, BioLab-II, 75 Po-Ai Street, Hsinchu, Taiwan 300

    Lectures

    演化生物學
    Evolutionary Biology


    分子演化
    Molecular Evolution

    生資生物學
    Advanced Biology


    普通生物學(一)
    General Biology (I)


    計算生物學(二)
    Computational Biology (II)

    Links

    NCBI
    EnsEMBL
    Approved Sequencing Targets
    UCSC Genome Bioinformatics
    Stanford Genomic Resources
    SGD
    SMD
    MIPS
    RCSB PDB
    SCOP
    ExPASy - SwissProt - PROSITE
    CE - Combinatorial Extension

    MEGA
    PAUP
    PAML
    PhyML
    CONSEL
    MacClade
    MRBAYES
    DAMBE package
    LiKaKs
    DnaSP
    Arlequin
    MCL - a cluster algorithm for graphs
    The R Manuals
    SimpleR
    Contingency Table Test (Chi^2)
    Fisher's Exact Test
    Kolmogorov-Smirnov Test

    Nature
    Science
    Nature Genetics
    Nature Biotechnology
    PNAS
    Cell
    EMBO
    PLoS Biology
    Current Biology
    Trends in Genetics
    Genome Research
    Genome Biology
    Molecular Biology & Evolution
    Nucleic Acids Research
    Genetics
    Evolution
    Bioinformatics
    Journal of Molecular Biology
    Journal of Molecular Evolution
    MPE
    Proteins
    Gene

    國家科學委員會
    ISI Web of Knowledge
    集中採購共同供應契約一覽表
    政府電子採購網
    Main Page Lab Members Lectures Resources Bioinformatics Center