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林勇欣 助理教授 國立交通大學 生物資訊及系統生物研究所 Yeong-Shin Lin, Assistant Professor Institute of Bioinformatics and Systems Biology National Chiao Tung University Hsinchu, Taiwan |
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Research InterestsOur major interest is in the processes and mechanisms of Evolution. We also use evolutionary concepts to study Genomics, Structural Biology, Systems Biology, Phylogenetics and Biogeography. We use a wide range of research techniques, from the molecular to the organismal level, from DNA sequences to protein structures, from genomics to proteomics, and from experimental to computational studies, including developing Bioinformatic methods and tools, to study these problems.Publications
[e-journal] [PubMed] [IF] [[Cited by] Yeong-Shin Lin, Wei-Lun Hsu, Jenn-Kang Hwang*, and Wen-Hsiung Li*. (2007). Proportion of solvent-exposed amino acids in a protein and rate of protein evolution. Molecular Biology and Evolution. 24: 1005-1011. [e-journal] [PubMed] [IF] [Cited by] 
Yeong-Shin Lin, Jenn-Kang Hwang, and Wen-Hsiung Li*. (2007).
Protein complexity, gene duplicability and gene dispensability in the yeast genome.
Gene. 387: 109-117.[e-journal] [PubMed] [IF] [Cited by] Yeong-Shin Lin, Jake K. Byrnes, Jenn-Kang Hwang, and Wen-Hsiung Li*. (2006). Codon usage bias versus gene conversion in the evolution of yeast duplicate genes. Proc. Natl. Acad. Sci. USA. 103: 14412-14416. [e-journal] [PubMed] [IF] [Cited by] 
Yeong-Shin Lin*. (2008). Using a strategy based on the concept of convergent evolution to identify residue substitutions responsible for thermal adaptation.
Proteins: structure, function, and bioinformatics. 73: 53-62.[e-journal] [PubMed] [IF] [Cited by] Chih-Hao Lu, Yeong-Shin Lin, Yu-Ching Chen, Chin-Sheng Yu, Shi-Yu Chang, and Jenn-Kang Hwang*. (2006). The fragment transformation method to detect the protein structural motifs. Proteins: structure, function, and bioinformatics. 63: 636-643. [e-journal] [PubMed] [IF] [Cited by] Yu-Ching Chen, Yeong-Shin Lin, Chih-Jen Lin and Jenn-Kang Hwang*. (2004). Prediction of the bonding states of cysteines using the Support Vector Machines based on multiple feature vectors and Cysteine State Sequences. Proteins: structure, function, and bioinformatics. 55: 1036-1042. [e-journal] [PubMed] [IF] [Cited by]
[e-journal] [PubMed] [IF] [Cited by] 
Chyng-Shyan Tzeng*,
Yeong-Shin Lin, Si-Min Lin, Tzi-Yuan Wang, and Feng-Yung Wang. (2006).
The phylogeography and population demographics of selected freshwater fishes in Taiwan.
Zoological Studies. 45: 285-297.[e-journal] [PubMed] [IF] [Cited by] Yeong-Shin Lin*, Chyng-Shyan Tzeng, and Jenn-Kang Hwang*. (2005). Reassessment of morphological characteristics in freshwater eels (genus Anguilla, Anguillidae) shows congruence with molecular phylogeny estimates. Zoologica Scripta. 34: 225-234. [e-journal] [PubMed] [IF] [Cited by] Yeong-Shin Lin, Yu-Ping Poh, Si-Min Lin, and Chyng-Shyan Tzeng*. (2002). Molecular techniques to identify freshwater eels: RFLP analyses of PCR-amplified DNA fragments and allele-specific PCR from mitochondrial DNA. Zoological Studies. 41: 421-430. [e-journal] [PubMed] [IF] [Cited by] 
Yeong-Shin Lin, Yu-Ping Poh, and
Chyng-Shyan Tzeng*. (2001).
Which is the dispersal route of the ancient Atlantic eels: Reanalysis of the
phylogeny of freshwater eels.
Journal of Taiwan Fisheries Research. 9: 161-173.[e-journal] [PubMed] [IF] [Cited by] Yeong-Shin Lin, Yu-Ping Poh, and Chyng-Shyan Tzeng*. (2001). A phylogeny of freshwater eels inferred from mitochondrial genes. Molecular Phylogenetics and Evolution. 20: 252-261. [e-journal] [PubMed] [IF] [Cited by] [Cited by The Eel ] |
Contact
Lectures演化生物學Evolutionary Biology 分子演化 Molecular Evolution 普通生物學（一） General Biology (I) 計算生物學（二） Computational Biology (II) 遺傳學 Genetics 生資生物學 Advanced Biology LinksNCBIEnsEMBL Genome OnLine Database Approved Sequencing Targets UCSC Genome Bioinformatics Stanford Genomic Resources TGI - The Gene Index J. Craig Venter Institute HapMap SGD SMD MIPS RCSB PDB SCOP ExPASy - SwissProt - PROSITE CE - Combinatorial Extension MEGA PAUP PAML PhyML CONSEL MacClade MrBayes DAMBE package LiKaKs DnaSP Arlequin MCL - a cluster algorithm for graphs The R Manuals SimpleR Contingency Table Test (Chi^2) Fisher's Exact Test Kolmogorov-Smirnov Test Nature Science Nature Genetics Nature Biotechnology PNAS Cell EMBO PLoS Biology Current Biology Trends in Genetics Genome Research Genome Biology Molecular Biology & Evolution Nucleic Acids Research Genetics Evolution Bioinformatics Journal of Molecular Biology Journal of Molecular Evolution MPE Proteins Gene 國家科學委員會 ISI Web of Knowledge 集中採購共同供應契約一覽表 政府電子採購網 |
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