林勇欣 副教授 國立交通大學 生物資訊及系統生物研究所

Yeong-Shin Lin, Associate Professor
Institute of Bioinformatics and Systems Biology
National Chiao Tung University
Hsinchu, Taiwan
Main Page Lab Members Lectures Resources Bioinformatics Center

演化生物學 Evolutionay Biology

Time:13:20 ~ 16:20 on Friday
Room:博愛校區 學生活動中心 BC207
Textbook:"Evolutionary Analysis" by Herron, J.C. & Freeman, S., 2015. Ed. 5. Pearson.
Grading:期初指定一篇論文,學生利用上課學習到的知識,於期中時繳交論文摘要[用自己的話(中文)重新闡述論文內容],學期末繳交論文讀後心得報告。
期中報告 30%,期末報告 30%,期末考 40%
Assigned paper:Pinheiro et al. (2017). Island biogeography of marine organisms. Nature. doi:10.1038/nature23680.
Office hour:16:00 ~ 17:00 on Monday
16:00 ~ 17:00 on Tuesday
TA:
Reference: 課本網站 http://www.pearsonhighered.com/educator/product/Evolutionary-Analysis/9780321616678.page
物種原始 http://www.talkorigins.org/faqs/origin.html

9/15A case for evolutionary thinking: Understanding HIVPPT
9/22The pattern of evolution
Evolution by natural selection
PPT
PPT
9/29Estimating evolutionary treesPPT
10/6Variation among individualsPPT
10/13Mendelian genetics in populations I: Selection and mutationPPT
10/20Mendelian genetics in populations II: Migration, drift, and nonrandom matingPPT
10/27Evolution at multiple loci: linkage and sexPPT
11/3Evolution at multiple loci: Quantitative geneticsPPT
11/10Studying adaptation: Evolutionary analysis of form and function
期中報告
PPT
11/17Sexual selectionPPT
11/24The evolution of social behaviorPPT
12/1Aging and other life history charactersPPT
12/8Evolution and human health
Genome evolution and the molecular basis of adaptation
PPT
PPT
12/15Mechanisms of speciationPPT
12/22The origins of life and Precambrian evolution
Evolution and the fossil record
PPT
PPT
12/29Development and evolutionPPT
1/5Human evolutionPPT
1/12期末考
期末報告





普通生物學(一) General Biology (I)

Time:1CD 3E
Room:EC022
Textbook:"Biology, 11th Edition" by Campbell, Urry, Cain, Wasserman, Minorsky, and Reece; Pearson 2018
Grading:期末考 33%
Office hour:16:00 ~ 17:00 on Monday
16:00 ~ 17:00 on Tuesday
TA:潘承宗

12/4, 12/6The evolution of genomes
(12/6 全校運動會)
PPT
12/11, 12/13How evolution worksPPT
12/18, 12/20Phylogenetic reconstructionPPT
12/25, 12/27MicroevolutionPPT
1/1, 1/3Species and speciation
(1/1 元旦)
PPT
1/8, 1/10Macroevolution
(1/10 Final Examination)
PPT



普通生物學(一) General Biology (I)

Time:3F 4EF
Room:SC109
Textbook:"Biology, 11th Edition" by Campbell, Urry, Cain, Wasserman, Minorsky, and Reece; Pearson 2018
Grading:期末考 33%
Office hour:16:00 ~ 17:00 on Monday
16:00 ~ 17:00 on Tuesday
TA:潘承宗

12/6, 12/7The evolution of genomes
(12/6 全校運動會)
PPT
12/13, 12/14How evolution worksPPT
12/20, 12/21Phylogenetic reconstructionPPT
12/27, 12/28MicroevolutionPPT
1/3, 1/4Species and speciation
Macroevolution
PPT
PPT
1/10Final Examination

Contact

Office:+886-3-5712121 # 56960
Fax:+886-3-5729288
+886-3-5712121 # 56960
Email:yslinfaculty.nctu.edu.tw
Address:新竹市博愛街75號
生科實驗二館 103室
R103, BioLab-II, 75 Po-Ai Street, Hsinchu, Taiwan 30068


Lab:+886-3-5712121 # 56961

Lectures

普通生物學(一)
General Biology (I)


計算生物實驗
Computational Biology Lab.

遺傳學
Genetics

演化生物學
Evolutionary Biology


分子演化
Molecular Evolution

Links

NCBI
EnsEMBL
Genome OnLine Database
Approved Sequencing Targets
UCSC Genome Bioinformatics
Stanford Genomic Resources
TGI - The Gene Index
J. Craig Venter Institute
Broad Institute
HapMap
SGD
SMD
MIPS
RCSB PDB
SCOP
ExPASy - SwissProt - PROSITE
CE - Combinatorial Extension
RepeatMasker

MEGA
PAUP
PAML
PhyML
CONSEL
MacClade
MrBayes
DAMBE
LiKaKs
Structure (population)
DnaSP
Arlequin
MCL - a cluster algorithm for graphs
The R Manuals
SimpleR
Chi-square Test
Fisher's Exact Test
Kolmogorov-Smirnov Test

Nature
Science
PNAS
PLoS Biology
Current Biology
Cell
EMBO
Nature Ecology & Evolution
Nature Genetics
Nature Biotechnology
Trends in Genetics
Genome Research
Genome Biology
Molecular Biology & Evolution
Nucleic Acids Research
Genetics
Evolution
Bioinformatics
Journal of Molecular Biology
Journal of Molecular Evolution
MPE
Proteins
Gene

科技部
ISI Web of Knowledge
集中採購共同供應契約一覽表
政府電子採購網
交大購運組
學網網路電話
Main Page Lab Members Lectures Resources Bioinformatics Center